Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918452.1_cds_XP_016467886.1_60587
CDS Infomation

[gene=LOC107790477] [db_xref=GeneID:107790477] [protein=shaggy-related protein kinase delta] [partial=5'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016467886.1] [location=complement(join(10072..10160,11727..11829,11919..12002,17001..17096,18136..18186,18277..18417,18508..18564,19373..>19447))] [gbkey=CDS]
Sequence

ATATGCAGGGCGCTGGCTTATATTCATAACTGTATTGGCATCTGTCACCGTGATATCAAG
CCTCAAAATTTACTGGTAAATCCACACACGCATCAGCTGAAGCTTTGTGATTTTGGAAGT
GCAAAAGTTTTGGTGAAAGGTGAACCCAATGTGTCATATATCTGTTCGAGATATTATCGT
GCCCCTGAACTCATATTTGGTGCCACCGAATACACAACAGCTATTGATATTTGGTCTACA
GGTTGTGTAATGGCTGAGTTACTTCTTGGACAGCCATTGTTTCCCGGAGAGAGTGGGGTT
GACCAATTAGTAGAGATTATAAAGGTTTTGGGGACACCTACTAGAGAGGAGATAAAATGC
ATGAATCCTAACTACACCGAGTTTAAATTTCCACAAATAAAGCCACACCCATGGCACAAG
GTTTTTCAGAAGCGATTGCCTCCAGAAGCAGTTGACCTGTTGTGTCGGTTTTTCCAGTAT
TCACCCTATTTGAGATGCACTGCTTTGGAGGCTTGTATTCATCCATTCTTTGATGAGTTG
AGGGATCCTAATACCCGTCTTCCTAATGGTCGCCCTCTTCCACCACTTCTCAATTTCAAG
CCGCAAGAGCTCACTGGAATTCCTCCTGAAACTCTCCAGCGTCTCATTCCAGAACATGCT
CGAAGACAGAATTTATTCATGGCTTTACGATCCTAG

Peptide Sequence

PEP ID

XP_016467886.1
PEP Infomation

PREDICTED: shaggy-related protein kinase delta [Nicotiana tabacum]
Sequence

MNQKMPLIYAKLYTYQICRALAYIHNCIGICHRDIKPQNLLVNPHTHQLKLCDFGSAKVL
VKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLV
EIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLLCRFFQYSPYL
RCTALEACIHPFFDELRDPNTRLPNGRPLPPLLNFKPQELTGIPPETLQRLIPEHARRQN
LFMALRS

Transcript Sequence

Gene sequence data has not been registered.